Conspicuous variation of the lattice unit cell in the pavonite homologous series and its relation with cation/anion occupational modulations

Authors:

Perez-Mato, J.M.; Elcoro, Luis; Makovicky, Emil; Topa, Dan; Petricek, Vaclav; Madariaga, Gotzon

Journal:

Materials Research Bulletin 48 2166-2174 (2013)

DOI:

http://dx.doi.org/10.1016/j.materresbull.2013.02.008

B-IncStrDB ID: ZyIGNQpBauM Entry date: 2021-10-26 Last revision: 2024-01-02

3D

Chemical data


Full Name: ? [ Help ]

Structural Formula Sum: Ag6 Bi14 S24 [ Help ]

Formula moiety: Ag6 Bi14 S24 [ Help ]

Formula weight: 4342.38 Da [ Help ]

Crystallographic data and experimental details


Crystal system: monoclinic [ Help ]

Space group name (H-M): C 1 2/m 1 [ Help ]

Space group name (Hall): -C 2y [ Help ]

Space group nb.: 12 [ Help ]

Symmetry operations of the space group: [ Help ]

Operation code Operation in algebraic form
1 x,y,z
2 -x,y,-z
3 -x,-y,-z
4 x,-y,z
5 x+1/2,y+1/2,z
6 -x+1/2,y+1/2,-z
7 -x+1/2,-y+1/2,-z
8 x+1/2,-y+1/2,z

a: 13.196(4) Å [ Help ]

b: 4.031(1) Å [ Help ]

c: 20.277(6) Å [ Help ]

α: 90 ° [ Help ]

β: 102.98(5) ° [ Help ]

γ: 90 ° [ Help ]

Volume: 1051.0(6) Å3 [ Help ]

Z: 1 [ Help ]

Cell measurement temperature: 293(2) K [ Help ]

Cell determination reflection Nb.: 2756 [ Help ]

θ(max) for cell determination: 28.20 ° [ Help ]

θ(min) for cell determination: 2.06 ° [ Help ]

μ: 62.276 mm-1 [ Help ]

Absorption correction type: empirical [ Help ]

Absorption correction remarks: Absorption correction was performed using XPREP (Bruker AXS, 1997) as an empirical absorption correction using psi-scans. [ Help ]

Maximum transmission factor: 0.517 [ Help ]

Minimum transmission factor: 0.169 [ Help ]

Experimental remarks: ? [ Help ]

Refinement details


Refinement remarks: [ Help ]

Total nb. of reflections: 1421 [ Help ]

Nb. of observed reflections: 1106 [ Help ]

Intense reflections threshold: >3σ(I) [ Help ]

Refinement based on: F [ Help ]

Matrix type used for the least-squares: full [ Help ]

R(all): 0.0677 [ Help ]

R(obs): 0.0524 [ Help ]

wR(all): 0.0594 [ Help ]

S(all): 2.80 [ Help ]

Restrained S(all): 3.12 [ Help ]

Nb. of reflections: 1421 [ Help ]

Nb. of parameters: 71 [ Help ]

Number of restraints: 0 [ Help ]

Number of constraints: 12 [ Help ]

Refinement of hydrogen atoms: undef [ Help ]

Weighting scheme: sigma [ Help ]

Weighting scheme remarks: w=1/(σ2(F)+0.0001F2) [ Help ]

Δ/σ(max): 0.0095 [ Help ]

Δ/σ(mean): 0.0007 [ Help ]

Δρ(max): 12.49 e_Å-3 [ Help ]

Δρ(min): -3.62 e_Å-3 [ Help ]

Extinction method: none [ Help ]

Structural Information


Average Structure: [ Help ]

Atom site label Atom symbol x y z ADP type Uiso/equiv Symmetry multiplicity Occupancy Coords from (d)iffraction or (c)alculated Coords restraints or constraints Disordered cluster Disordered group
Bi1-1 Bi 0 0 0 Uani 0.0140(4) 2 1 d . . .
Bi1-2 Bi 0.30280(15) 0 0.08955(10) Uani 0.0271(7) 4 0.248(12) d . . .
Bi1-3 Bi 0.61480(8) 0 0.17904(5) Uani 0.0142(3) 4 1 d . . .
Bi1-4 Bi 0.92151(9) 0 0.26875(6) Uani 0.0156(4) 4 0.728(11) d . . .
S1-8 S 0.1250(6) 0 0.6127(4) Uani 0.021(2) 4 1 d . . .
S1-9 S 0.4325(5) 0 0.6999(3) Uani 0.015(2) 4 1 d . . .
S1-10 S 0.7364(5) 0 0.7852(4) Uani 0.024(2) 4 1 d . . .
S1-11 S 0.0377(5) 0 0.8693(3) Uani 0.017(2) 4 1 d . . .
S1-12 S 0.3459(5) 0 0.9649(4) Uani 0.020(2) 4 1 d . . .
S2-18 S 0.3636(6) 0 0.5277(4) Uani 0.020(2) 4 1 d . . .
Ag-17 Ag 0 0 0.5 Uani 0.0376(13) 2 1 d . . .
Bi3-5 Bi 0.23982(9) 0 0.40878(6) Uani 0.0216(4) 4 1 d . . .
Ag1-2 Ag 0.30280(15) 0 0.08955(10) Uani 0.0271(7) 4 0.752(12) d . . .
Ag1-4 Ag 0.92151(9) 0 0.26875(6) Uani 0.0156(4) 4 0.272(11) d . . .

ADP components: [ Help ]

Atom site label Atom site symbol U11 U22 U33 U12 U13 U23
Bi1-1 Bi 0.0206(8) 0.0106(7) 0.0098(7) 0 0.0009(6) 0
Bi1-2 Bi 0.0263(12) 0.0277(12) 0.0278(13) 0 0.0070(8) 0
Bi1-3 Bi 0.0161(5) 0.0106(5) 0.0150(6) 0 0.0020(4) 0
Bi1-4 Bi 0.0212(7) 0.0148(7) 0.0119(7) 0 0.0059(5) 0
S1-8 S 0.033(4) 0.021(4) 0.012(4) 0 0.010(3) 0
S1-9 S 0.017(3) 0.021(3) 0.007(3) 0 -0.002(3) 0
S1-10 S 0.016(4) 0.015(3) 0.038(5) 0 0.002(3) 0
S1-11 S 0.021(4) 0.019(3) 0.012(4) 0 0.006(3) 0
S1-12 S 0.018(4) 0.014(3) 0.028(4) 0 0.007(3) 0
S2-18 S 0.028(4) 0.022(4) 0.009(3) 0 0.000(3) 0
Ag-17 Ag 0.026(2) 0.039(2) 0.043(2) 0 -0.003(2) 0
Bi3-5 Bi 0.0270(6) 0.0193(6) 0.0165(6) 0 0.0008(4) 0
Ag1-2 Ag 0.0263(12) 0.0277(12) 0.0278(13) 0 0.0070(8) 0
Ag1-4 Ag 0.0212(7) 0.0148(7) 0.0119(7) 0 0.0059(5) 0

I

Chemical data


Structural Formula Sum: Ag0.75 Bi1.75 S3 [ Help ]

Formula weight: 542.8 Da [ Help ]

Absolute configuration: . [ Help ]

Crystallographic data and experimental details


Crystal system: monoclinic [ Help ]

Superspace group name: C2/m(α0γ)00 [ Help ]

Symmetry operations of the superspace group: [ Help ]

Operation code Operation in algebraic form
1 x1,x2,x3,x4
2 -x1,x2,-x3,-x4
3 -x1,-x2,-x3,-x4
4 x1,-x2,x3,x4
5 x1+1/2,x2+1/2,x3,x4
6 -x1+1/2,x2+1/2,-x3,-x4
7 -x1+1/2,-x2+1/2,-x3,-x4
8 x1+1/2,-x2+1/2,x3,x4

a: 4.0072 Å [ Help ]

b: 4.031 Å [ Help ]

c: 2.8294 Å [ Help ]

α: 90 ° [ Help ]

β: 88.985 ° [ Help ]

γ: 90 ° [ Help ]

Volume: 45.69619 Å3 [ Help ]

Modulation dimension: 1 [ Help ]

Measured independent wave vectors: [ Help ]

Wave vector id q_x q_y q_z
1 0.956522 0.000000 0.434783

Z: 8 [ Help ]

Cell measurement temperature: 293 K [ Help ]

μ: 1744.565 mm-1 [ Help ]

Refinement details


Total nb. of reflections: 1421 [ Help ]

Nb. of observed reflections: 1106 [ Help ]

Intense reflections threshold: I>3σ(I) [ Help ]

Refinement based on: F [ Help ]

R(obs): 0.0511 [ Help ]

wR(obs): 0.0567 [ Help ]

R(all): 0.0659 [ Help ]

wR(all): 0.0581 [ Help ]

S(all): 2.74 [ Help ]

S(obs): 3.05 [ Help ]

Nb. of reflections: 1421 [ Help ]

Nb. of parameters: 73 [ Help ]

Number of restraints: 0 [ Help ]

Number of constraints: 3 [ Help ]

Weighting scheme: sigma [ Help ]

Weighting scheme remarks: w=1/(σ2(F)+0.0001F2) [ Help ]

Δ/σ(max): 0.0047 [ Help ]

Δ/σ(mean): 0.0004 [ Help ]

Extinction method: none [ Help ]

Structural Information


Average Structure: [ Help ]

Atom site label Atom symbol x y z ADP type Uiso/equiv Symmetry multiplicity Occupancy Coords from (d)iffraction or (c)alculated Coords restraints or constraints Disordered cluster Disordered group
Bi1 Bi 0 0 0 Uani 0.0186(3) 2 0.227(3) d . . .
S1 S 0 0 0 Uani 0.0184(9) 2 0.4348 d . . .
S2 S 0.6187(18) 0 -0.033(2) Uani 0.020(2) 4 0.0435 d . . .
Ag Ag 0.5 0 0.5 Uani 0.0365(12) 2 0.0435 d . . .
Bi3 Bi 0.1283(3) 0 0.3818(4) Uani 0.0206(4) 4 0.0435 d . . .
Ag1 Ag 0 0 0 Uani 0.0186(3) 2 0.077(3) d . . .

ADP components: [ Help ]

Atom site label Atom site symbol U11 U22 U33 U12 U13 U23
Bi1 Bi 0.0212(4) 0.0170(4) 0.0177(4) 0 -0.0015(3) 0
S1 S 0.0198(15) 0.0170(15) 0.0185(17) 0 -0.0011(13) 0
S2 S 0.024(4) 0.021(3) 0.014(4) 0 -0.010(3) 0
Ag Ag 0.0223(18) 0.038(2) 0.050(2) 0 -0.0044(16) 0
Bi3 Bi 0.0236(6) 0.0184(6) 0.0201(7) 0 -0.0070(5) 0
Ag1 Ag 0.0212(4) 0.0170(4) 0.0177(4) 0 -0.0015(3) 0

Fourier Wave Vectors (explicit: q_x,q_y,q_z or coefficients: q_1,q_2,...): [ Help ]

Wave vector code q_1
1 1
2 2
3 3
4 4
5 5

Definition of the occupation Fourier series: [ Help ]

Modulation code Atom site label Wave vector code
Bi1o1 Bi1 1
Bi1o2 Bi1 2
Bi1o3 Bi1 3
Ag1o1 Ag1 1
Ag1o2 Ag1 2
Ag1o3 Ag1 3

Occupation Fourier coefficients: [ Help ]

Modulation code Cosine coefficient Sine coefficient
Bi1o1 -0.150(15) 0
Bi1o2 0.004(9) 0
Bi1o3 0.61(4) 0
Ag1o1 0.44(4) 0
Ag1o2 -0.01(3) 0
Ag1o3 -1.79(12) 0

Occupation crenel coefficients: [ Help ]

Atom site label Center (x0) Width
Bi1 0 0.3043
S1 0.5 0.4348
S2 0.838(2) 0.0435
Ag 0 0.0435
Bi3 0.1148(3) 0.0435
Ag1 0 0.3043

Displacive (translational) Legendre coefficients: [ Help ]

Atom site label Displacement axis Polynomial order Polynomial coeff.
Bi1 x 1 -0.0286(2)
Bi1 y 1 0
Bi1 z 1 -0.0382(3)
Bi1 x 2 0
Bi1 y 2 0
Bi1 z 2 0
Bi1 x 3 0.0038(3)
Bi1 y 3 0
Bi1 z 3 -0.0019(4)
Bi1 x 4 0
Bi1 y 4 0
Bi1 z 4 0
Bi1 x 5 0.0096(4)
Bi1 y 5 0
Bi1 z 5 -0.0070(5)
Bi1 x 6 0
Bi1 y 6 0
Bi1 z 6 0
S1 x 1 -0.0088(12)
S1 y 1 0
S1 z 1 0.0463(17)
S1 x 2 0
S1 y 2 0
S1 z 2 0
S1 x 3 -0.0050(13)
S1 y 3 0
S1 z 3 -0.0025(17)
S1 x 4 0
S1 y 4 0
S1 z 4 0
S1 x 5 -0.0038(14)
S1 y 5 0
S1 z 5 0.0240(19)
S1 x 6 0
S1 y 6 0
S1 z 6 0
S1 x 7 -0.0021(15)
S1 y 7 0
S1 z 7 0.003(2)
S1 x 8 0
S1 y 8 0
S1 z 8 0
S1 x 9 0.0097(17)
S1 y 9 0
S1 z 9 0.043(2)
S1 x 10 0
S1 y 10 0
S1 z 10 0
Ag1 x 1 -0.0286(2)
Ag1 y 1 0
Ag1 z 1 -0.0382(3)
Ag1 x 2 0
Ag1 y 2 0
Ag1 z 2 0
Ag1 x 3 0.0038(3)
Ag1 y 3 0
Ag1 z 3 -0.0019(4)
Ag1 x 4 0
Ag1 y 4 0
Ag1 z 4 0
Ag1 x 5 0.0096(4)
Ag1 y 5 0
Ag1 z 5 -0.0070(5)
Ag1 x 6 0
Ag1 y 6 0
Ag1 z 6 0